Features

Supported computers

  • Windows 10, Windows 11
  • MacOS
  • Linux (on request)
  • NVIDIA GPUs are used if available

Image data handling

  • Data import
  • Data export
  • Meta data handling
  • Support of 4D data (time series)
  • Support of 5D data (multiple channels)
  • Support of large image files (depending on available RAM)

Segmentation

  • 2D and 3D operations
  • Interactive delineation
  • Morphologic operations
  • Region growing
  • Find (connected, small, large) components
  • Segmentation painting/cleaning
  • Atlas-based workflows
  • Undo/redo

Image processing

  • Interactive cropping & cleaning
  • Resampling
  • Flipping, transpose
  • Conversion
  • Arithmetic operations
  • Filtering (e.g. Gaussian, Median filter)
  • Feature map generation
  • Undo/redo

Analysis and Quantification

  • Distance measurements in 2D and 3D
  • Angles
  • Region of interest quantification
  • Batch quantification
  • Surface area
  • Bone parameters
  • Histograms
  • Graphs (Time activity curves)

2D Visualization

  • 2D slice views (axial, coronal, sagittal)
  • Angulation to any 2D slice
  • Interactive windowing
  • Multimodal views in 2D
  • Video generation (slice-through & time)

3D Visualization

  • Multimodal views in 3D
  • 3D Iso, MIP, and volume rendering
  • Video generation (rotations & time)

Image Fusion

  • Interactive alignment
  • Marker-based fusion
  • Intensity-based fusion
  • 2D-3D fusion (e.g. for Bioluminescence or Fluorescence & µCT)
  • Image stitching (e.g. µCT subscans)
  • Multimodal device fusion (estimation and application of transform)

Nuclear imaging

  • SUV calibration (uses meta data from DICOM)
  • %ID/g calibration (uses meta data from DICOM)
  • Dosimetry (single and batch dose maps)
  • Decay correction
  • 4D data support
  • Automated SPECT/PET Nema phantom quantification

Pharmacokinetic modelling

  • Region-based fitting
  • Voxel-based fitting (parametric maps)
  • Patlak model
  • AIF generation, saving & loading
  • One-Tissue compartment models
  • Two-Tissue compartment models

Relaxometry

  • Region-based fitting
  • Voxel-based fitting (parametric maps)
  • T1-model
  • T2-model

3D Printing

  • STL-export of image iso surface
  • STL-export of classes
  • Support generation

Bone analysis

  • Trabecular thickness & separation
  • Bone statistics (Bone volume, bone volume fraction, bone surface, …)
  • BMD calibration and measurement
  • Local thickness and separation map

Vascular analysis

  • Vessel tortuosity
  • Vessel diameter measurements along vessel
  • Vessel diameter feature maps (distance maps)
  • Vesselness feature map generation

Extensions and interoperability

  • Data can be saved as DICOMs
  • Support of common file formats (.nii, .hdr, …)
  • Custom extensions via Python
  • Python code is available for free to load our file internal formats

Training material

  • Video tutorials
  • Example data sets
  • White papers
  • Manual
  • Installed with the software

Samples

  • Phantoms
  • Cells
  • Tissues
  • Organs
  • Bones
  • Tumors
  • Whole-body scans for insects, fish, birds, mice, rats, sheep, and other mammals